Search results for "Solanum lycopersicum"

showing 10 items of 103 documents

Amino acids in the second transmembrane helix of the Lhca4 subunit are important for formation of stable heterodimeric light-harvesting complex LHCI-…

2007

Photosynthetic light-harvesting complexes (LHCs) are assembled from apoproteins (Lhc proteins) and non-covalently attached pigments. Despite a considerable amino acid sequence identity, these proteins differ in their oligomerization behavior. To identify the amino acid residues determining the heterodimerization of Lhca1 and Lhca4 to form LHCI-730, we mutated the poorly conserved second transmembrane helix of the two subunits. Mutated genes were expressed in Escherichia coli and the resultant proteins were refolded in vitro and subsequently analyzed by gel electrophoresis. Replacement of the entire second helix in Lhca4 by the one of Lhca3 abolished heterodimerization, whereas it had no eff…

ChlorophyllModels MolecularMolecular Sequence DataLight-Harvesting Protein ComplexesBiologyProtein Structure SecondarySerineSolanum lycopersicumStructural BiologyChlorophyll bindingConsensus sequenceHistidineHomology modelingAmino Acid SequenceAmino AcidsProtein Structure QuaternaryMolecular BiologyPeptide sequenceHistidinePlant Proteinschemistry.chemical_classificationPhotosystem I Protein ComplexAmino acidTransmembrane domainProtein SubunitschemistryBiochemistryMutagenesisChlorophyll Binding ProteinsDimerizationSequence AlignmentJournal of molecular biology
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Discovery of a Major QTL Controlling Trichome IV Density in Tomato Using K-Seq Genotyping

2021

[EN] Trichomes are a common morphological defense against pests, in particular, type IV glandular trichomes have been associated with resistance against different invertebrates. Cultivated tomatoes usually lack or have a very low density of type IV trichomes. Therefore, for sustainable management of this crop, breeding programs could incorporate some natural defense mechanisms, such as those afforded by trichomes, present in certain Solanum species. We have identified a S. pimpinellifolium accession with very high density of this type of trichomes. This accession was crossed with a S. lycopersicum var. cerasiforme and a S. lycopersicum var. lycopersicum accessions, and the two resulting F2 …

0106 biological sciences0301 basic medicineGenotypelcsh:QH426-470QTLQuantitative Trait LociChromosome 9Genetic relationshiptomatoQuantitative trait locusMorfologia (Biologia)01 natural sciencesTomatoArticleTrichomes type IVCropK-seq03 medical and health sciencesSolanum lycopersicumGeneticsbiochemistryHumansGenotypingGenetics (clinical)Disease ResistancePlant DiseasesGeneticstrichomes type IVbiologyfungiGenètica vegetal<i>Solanum pimpinellifolium</i>Chromosome Mappingfood and beveragesSolanum pimpinellifoliumTrichomesbiology.organism_classificationSolanum pimpinellifoliumTrichomeGENETICAPlant Breedinglcsh:Genetics030104 developmental biologytrichomesSolanum010606 plant biology & botanyGenes
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Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance.

2000

AbstractPosttranscriptional gene silencing (PTGS) in plants results from the degradation of mRNAs and shows phenomenological similarities with quelling in fungi and RNAi in animals. Here, we report the isolation of sgs2 and sgs3 Arabidopsis mutants impaired in PTGS. We establish a mechanistic link between PTGS, quelling, and RNAi since the Arabidopsis SGS2 protein is similar to an RNA-dependent RNA polymerase like N. crassa QDE-1, controlling quelling, and C. elegans EGO-1, controlling RNAi. In contrast, SGS3 shows no significant similarity with any known or putative protein, thus defining a specific step of PTGS in plants. Both sgs2 and sgs3 mutants show enhanced susceptibility to virus, d…

0106 biological sciencesRNA-induced transcriptional silencingDNA PlantRNA-induced silencing complexTrans-acting siRNAMolecular Sequence DataPotyvirusArabidopsisRNA-dependent RNA polymerase[SDV.BC]Life Sciences [q-bio]/Cellular BiologyGenes Plant01 natural sciencesCucumovirusGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesSolanum lycopersicumRNA interferenceArabidopsisGene expressionGene silencingAmino Acid SequenceGene SilencingCloning MolecularRNA Processing Post-Transcriptional[SDV.BC] Life Sciences [q-bio]/Cellular BiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPlant DiseasesPlant ProteinsGenetics0303 health sciencesbiologyBase SequenceBiochemistry Genetics and Molecular Biology(all)Arabidopsis ProteinsfungiTobamovirusChromosome MappingGENETIQUEbiology.organism_classificationRNA-Dependent RNA PolymeraseMutagenesis010606 plant biology & botanyCell
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Selenium biofortification and grafting modulate plant performance and functional features of cherry tomato grown in a soilless system

2021

Abstract Selenium (Se) is an essential trace element for humans due to its importance in a number of enzymes. Vegetable grafting is a valuable tool to overcome biotic and/or abiotic issues and to increase vigour, yield traits and fruit quality. The present work aimed at testing both different Se concentrations (0.0, 1.0, 2.0 and 4.0 μmol Se L−1) supplied via fertigation and grafting on cherry tomato in soilless culture. Se at 2.0 μmol L−1 improved total fruit yield by 60.0 % and 31.4 % in ungrafted and grafted plants, respectively as compared to the control. Marketable yield was positively affected by Se-biofortification and grafting. Se at 2.0 μmol L−1 improved N use efficiency by 60.3 % a…

0106 biological sciences0301 basic medicineFunctional attributeBiofortificationHorticulture01 natural sciences03 medical and health scienceschemistry.chemical_compoundDry weightCherry tomatoCarotenoidchemistry.chemical_classificationbiologyfood and beveragesSe-biofortificationSolanum lycopersicum L.Hydroponicsbiology.organism_classificationAscorbic acidGraftingHealth-promoting compoundLycopeneHorticulture030104 developmental biologychemistryRootstock010606 plant biology & botanyScientia Horticulturae
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Colonization pattern of primary tomato roots by Pseudomonas fluorescens A6RI characterized by dilution plating, flow cytometry, fluorescence, confoca…

2004

Early colonization of primary tomato roots, grown in vitro, by Pseudomonas fluorescens A6RI, introduced by seed bacterization, was monitored for 7 days in three different root zones (zone A, apex+elongation+young hairy zone; zone B, hairy zone; zone C, old hairy zone+collar). Bacterial quantification was assessed by enumeration of (i) colony forming units (cfu) after dilution plating and of (ii) total bacterial cells by flow cytometry. Bacterial distribution and organization in the root zones were analyzed by fluorescence, confocal and scanning electron microscopy. For all sampling dates and zones, the densities of total bacterial cells were significantly higher than those of the cfu. The k…

Colony Count MicrobialPseudomonas fluorescensPseudomonas fluorescensPlant RootsApplied Microbiology and BiotechnologyMicrobiologylaw.inventionFlow cytometry03 medical and health sciencesSolanum lycopersicumlawConfocal microscopyBotanymedicine[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyComputingMilieux_MISCELLANEOUS030304 developmental biologyColony-forming unit0303 health sciencesMicroscopy ConfocalEcologybiologyEpidermis (botany)medicine.diagnostic_test030306 microbiologyFlow Cytometrybiology.organism_classificationApex (geometry)Horticulture[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMicroscopy FluorescenceMicroscopy Electron ScanningDNS root zoneElectron microscope
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A sensitive real-time RT-PCR reveals a high incidence of Southern tomato virus (STV) in Spanish tomato crops

2018

[EN] Southern tomato virus (STV) is a double-stranded RNA (dsRNA) virus belonging to genus Amalgavirus (family Amalgamaviridae). STV has been detected in tomato plants showing different symptoms although it has not been demonstrated that STV is the causal agent. To study the STV incidence and its pathogenic role, a sensitive and quantitative real-time reverse transcription-polymerase chain reaction assay (RT-qPCR) was developed. The standard curve perfonned with viral RNA transcripts allowed a wide dynamic range for STV quantitation from 10(4) to 10(11) copies/ng of total RNA. STV detection by RT-qPCR was 10(2)-fold more sensitive than conventional RT-PCR or RT-LAMP and 10(4)-fold more sens…

0301 basic medicineBiologySolanum lycopersicum; Amalgaviridae; Amalgavirus; persistent viruses; RT-qPCRViruslcsh:Agriculture03 medical and health sciencesSolanum lycopersicumTranscription (biology)Plant virusGene expressionPRODUCCION VEGETALGenePersistent virusesfungiRT-qPCRlcsh:SRNAfood and beveragesMICROBIOLOGIAagriculture; plant protectionAmalgaviridaeVirologyRNA silencingAmalgavirusGENETICA030104 developmental biologyReal-time polymerase chain reactionAgronomy and Crop Science
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Strategies to decrease water drainage and nitrate emission from soilless cultures of greenhouse tomato

2010

In the spring-summer season of 2005 and 2006, we explored the influence of three fertigation strategies (A–C) on the water and nitrogen use efficiency of semi-closed rockwool culture of greenhouse tomato conducted using saline water (NaCl concentration of 9.5 mol m−3). The strategies under comparison were the following: (A) crop water uptake was compensated by refilling the mixing tank with nutrient solution at full strength (with the concentrations of macronutrients equal or close to the corresponding mean uptake concentrations as determined in previous studies) and the recirculating nutrient solution was flushed out whenever its electrical conductivity (EC) surpassed 4.5 dS m−1 due to the…

ChemistrySoil ScienceFertigation Hydroponics Nitrate Directive Nitrogen use efficiencyHydroponicsSaline waterRecirculating nutrient solution Solanum lycopersicum Salinity Semi-closed growing systems Water use efficiencychemistry.chemical_compoundAnimal scienceNutrientAgronomyNitrateWastewaterWater-use efficiencyAgronomy and Crop ScienceSurface waterWater useEarth-Surface ProcessesWater Science and TechnologyAgricultural Water Management
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Expression of xyloglucan endotransglucosylase/hydrolase (XTH) genes and XET activity in ethylene treated apple and tomato fruits.

2013

[EN] Xyloglucan endotransglucosylase/hydrolase (XTHs: EC 2.4.1.207 and/or EC 3.2.1.151), a xyloglucan modifying enzyme, has been proposed to have a role during tomato and apple fruit ripening by loosening the cell wall. Since the ripening of climacteric fruits is controlled by endogenous ethylene biosynthesis, we wanted to study whether XET activity was ethylene-regulated, and if so, which specific genes encoding ripening-regulated XTH genes were indeed ethylene-regulated. XET specific activity in tomato and apple fruits was significantly increased by the ethylene treatment, as compared with the control fruits, suggesting an increase in the XTH gene expression induced by ethylene. The 25 Sl…

0106 biological sciencesEthylenePhysiologyPlant ScienceBiologyTransglucosylation and xyloglucan01 natural sciencesCell wall03 medical and health scienceschemistry.chemical_compoundSolanum lycopersicumPlant Growth RegulatorsGene Expression Regulation PlantGene expressionBIOQUIMICA Y BIOLOGIA MOLECULARGenePhylogeny030304 developmental biology2. Zero hunger0303 health sciencesSequence Homology Amino AcidCell wallAgriculturaGlycosyltransferasesfood and beveragesRipeningSequence Analysis DNAXyloglucan endotransglucosylaseEthylenesFruit ripeningXyloglucanMalus domesticachemistryBiochemistryFruitMalusClimactericAgronomy and Crop Science010606 plant biology & botany
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Apple (Malus domestica) and Tomato (Lycopersicum esculentum) Fruits Cell-Wall Hemicelluloses and Xyloglucan Degradation during Penicillium expansum I…

2004

We characterized the changes in cell-wall hemicellulosic polysaccharides and the hemicellulose-degrading enzymes associated with apple and tomato fruits infected by Penicillium expansum. Our results showed a reduction in the molecular mass of hemicelluloses, with this reduction being particularly notable in the xyloglucan associated with P. expansum infection. The activation of fungal beta-glucanases was also highlighted. Fruit xyloglucan endotransglucosylase/hydrolase (XTH)-specific activity decreased drastically during the infection process in both apple and tomato fruits. We suggest that XTH reduction during the infection might be related with the fungus attack mechanism. We also suggest…

MalusRosaceaeCellulasePolysaccharideCell wallchemistry.chemical_compoundSolanum lycopersicumCell WallPolysaccharidesBotanyskin and connective tissue diseasesGlucansPlant Diseaseschemistry.chemical_classificationbiologyfungiPenicilliumfood and beveragesGeneral Chemistrybiology.organism_classificationXyloglucanHorticulturechemistryFruitMalusbiology.proteinXylanssense organsPenicillium expansumGeneral Agricultural and Biological SciencesSolanaceaeJournal of Agricultural and Food Chemistry
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Pseudomonas corrugata contains a conserved N-acyl homoserine lactone quorum sensing system; its role in tomato pathogenicity and tobacco hypersensiti…

2007

Pseudomonas corrugata is a phytopathogenic bacterium, causal agent of tomato pith necrosis, yet it is an ubiquitous bacterium that is part of the microbial community in the soil and in the rhizosphere of different plant species. Although it is a very heterogeneous species, all the strains tested were able to produce short chain acyl homoserine lactone (AHL) quorum sensing signal molecules. The main AHL produced was N-hexanoyl-l-homoserine lactone (C6-AHL). An AHL quorum sensing system, designated PcoI/PcoR, was identified and characterized. The role of the quorum sensing system in the expression of a variety of traits was evaluated. Inactivation of pcoI abolished the production of AHLs. The…

Pseudomonas corrugateHypersensitivity responseVirulenceEcologyQuorum SensingSettore AGR/12 - Patologia VegetalePseudomonas corrugatatomato pith necrosisPseudomonaMicrobiologyApplied Microbiology and BiotechnologyPseudomonas corrugata; quorum sensing; tomato pith necrosisTomato pith necrosiSolanum lycopersicum4-ButyrolactonePseudomonasAcyl homoserine lactoneMutationTobaccoMicrobial antagonismLycopersicon esculentum
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